STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lon-3-2Cuticle collagen lon-3. (394 aa)    
Predicted Functional Partners:
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.878
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.878
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.736
pro-1
Pre-rRNA-processing protein pro-1.
    
 0.606
trio
Triple functional domain protein.
    
 0.604
D917_02132
14-3-3-like protein 2; Belongs to the 14-3-3 family.
    
 0.601
T02_9276
Protection of telomeres protein 1.
    
 0.570
Apaf1
Apoptotic protease-activating factor 1.
    
 0.564
T02_400
Uncharacterized protein.
    
 0.559
T02_14683
Serine-rich 25 kDa antigen protein.
    
 0.552
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.