STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARS2Serine--tRNA ligase, mitochondrial. (443 aa)    
Predicted Functional Partners:
mtacp1
Acyl carrier protein, mitochondrial.
   
 
 0.943
Vars
Valine--tRNA ligase.
  
 
 0.836
yars
Tyrosine--tRNA ligase.
  
  
 0.804
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.804
Kars
Lysine--tRNA ligase.
  
 
 0.800
D917_01143
Glycine--tRNA ligase.
   
  
 0.794
T02_8069
Uncharacterized protein.
     
 0.792
RARS2
Putative arginine--tRNA ligase, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.768
TMEM245-2
Arginine--tRNA ligase, cytoplasmic.
  
 
 0.767
WARS
Tryptophan--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.760
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.