STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgc-50-2Ligand-gated ion channel 50; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (438 aa)    
Predicted Functional Partners:
Rdl
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.628
cin
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.610
exp-1
Gamma-aminobutyric acid receptor exp-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.566
deg-3
Acetylcholine receptor subunit alpha-type deg-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.500
deg-3-2
Acetylcholine receptor subunit alpha-type deg-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.484
cup-4-2
Acetylcholine receptor-like protein cup-4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.469
CHRNA10
Neuronal acetylcholine receptor subunit alpha-10; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.448
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.