Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AP1G1 | Ap2b1 | A0A0V1LLI4 | A0A0V1L2F1 | AP-1 complex subunit gamma-1. | AP complex subunit beta. | 0.999 |
AP1G1 | T02_2794 | A0A0V1LLI4 | A0A0V1L767 | AP-1 complex subunit gamma-1. | DDE_Tnp_1_7 domain-containing protein. | 0.483 |
AP1G1 | T02_2950 | A0A0V1LLI4 | A0A0V1LEX1 | AP-1 complex subunit gamma-1. | DDE_Tnp_1_7 domain-containing protein. | 0.483 |
Ap2b1 | AP1G1 | A0A0V1L2F1 | A0A0V1LLI4 | AP complex subunit beta. | AP-1 complex subunit gamma-1. | 0.999 |
Ap2b1 | Ap3d1 | A0A0V1L2F1 | A0A0V1KU29 | AP complex subunit beta. | AP-3 complex subunit delta-1. | 0.989 |
Ap2b1 | T02_12200 | A0A0V1L2F1 | A0A0V1LDZ0 | AP complex subunit beta. | DDE_Tnp_1_7 domain-containing protein. | 0.452 |
Ap2b1 | T02_2794 | A0A0V1L2F1 | A0A0V1L767 | AP complex subunit beta. | DDE_Tnp_1_7 domain-containing protein. | 0.524 |
Ap2b1 | T02_2950 | A0A0V1L2F1 | A0A0V1LEX1 | AP complex subunit beta. | DDE_Tnp_1_7 domain-containing protein. | 0.524 |
Ap3d1 | Ap2b1 | A0A0V1KU29 | A0A0V1L2F1 | AP-3 complex subunit delta-1. | AP complex subunit beta. | 0.989 |
Ap3d1 | T02_2794 | A0A0V1KU29 | A0A0V1L767 | AP-3 complex subunit delta-1. | DDE_Tnp_1_7 domain-containing protein. | 0.483 |
Ap3d1 | T02_2950 | A0A0V1KU29 | A0A0V1LEX1 | AP-3 complex subunit delta-1. | DDE_Tnp_1_7 domain-containing protein. | 0.483 |
DDX1 | T02_15135 | A0A0V1L5X4 | A0A0V1L0K4 | ATP-dependent RNA helicase DDX1. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.961 |
DDX1 | T02_2794 | A0A0V1L5X4 | A0A0V1L767 | ATP-dependent RNA helicase DDX1. | DDE_Tnp_1_7 domain-containing protein. | 0.492 |
DDX1 | T02_2950 | A0A0V1L5X4 | A0A0V1LEX1 | ATP-dependent RNA helicase DDX1. | DDE_Tnp_1_7 domain-containing protein. | 0.492 |
Gfod1 | T02_12200 | A0A0V1L0T5 | A0A0V1LDZ0 | Glucose-fructose oxidoreductase domain-containing protein 1. | DDE_Tnp_1_7 domain-containing protein. | 0.574 |
Gfod1 | T02_2794 | A0A0V1L0T5 | A0A0V1L767 | Glucose-fructose oxidoreductase domain-containing protein 1. | DDE_Tnp_1_7 domain-containing protein. | 0.488 |
Gfod1 | T02_2950 | A0A0V1L0T5 | A0A0V1LEX1 | Glucose-fructose oxidoreductase domain-containing protein 1. | DDE_Tnp_1_7 domain-containing protein. | 0.488 |
T02_11955 | T02_2794 | A0A0V1KV46 | A0A0V1L767 | DDE_Tnp_1_7 domain-containing protein. | DDE_Tnp_1_7 domain-containing protein. | 0.476 |
T02_12200 | Ap2b1 | A0A0V1LDZ0 | A0A0V1L2F1 | DDE_Tnp_1_7 domain-containing protein. | AP complex subunit beta. | 0.452 |
T02_12200 | Gfod1 | A0A0V1LDZ0 | A0A0V1L0T5 | DDE_Tnp_1_7 domain-containing protein. | Glucose-fructose oxidoreductase domain-containing protein 1. | 0.574 |
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