STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zmpste24CAAX prenyl protease 1-like protein. (527 aa)    
Predicted Functional Partners:
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.910
Fntb
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.897
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.897
Sras
CAAX prenyl protease 2.
    
 0.884
Sras-2
CAAX prenyl protease 2.
    
 0.884
Roe1
GrpE-like protein, mitochondrial; Belongs to the GrpE family.
  
  
 0.771
lamtor2
Caseinolytic peptidase B-like protein.
  
  
 0.743
hspe1
10 kDa heat shock protein, mitochondrial; Belongs to the GroES chaperonin family.
  
  
 0.694
Sec61a2
Protein transport protein Sec61 subunit alpha isoform 2.
  
 
 0.675
Lonp1
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.659
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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