STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T02_4627Uncharacterized protein. (692 aa)    
Predicted Functional Partners:
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 
 0.761
Mrps7
28S ribosomal protein S7, mitochondrial.
   
   0.729
MRPS2
28S ribosomal protein S2, mitochondrial.
   
 
 0.714
mrpl-49
Putative 39S ribosomal protein L49, mitochondrial.
   
 
 0.711
AIMP2
Putative 28S ribosomal protein S25, mitochondrial.
   
 
 0.705
Mrpl16
39S ribosomal protein L16, mitochondrial.
   
  0.674
MRPL12
39S ribosomal protein L12, mitochondrial.
   
   0.669
T02_5310
Uncharacterized protein.
   
 
 0.649
F02A9.4
Uncharacterized protein.
   
 
 0.645
Mrpl17
39S ribosomal protein L17, mitochondrial.
   
   0.640
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.