STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD4-10PiggyBac transposable element-derived protein 4. (364 aa)    
Predicted Functional Partners:
DRTS
Bifunctional dihydrofolate reductase-thymidylate synthase.
  
 
 0.841
Cyb5r4
Cytochrome b5 reductase 4.
  
 0.820
FDX1L
Putative 2Fe-2S iron-sulfur cluster binding domain protein.
  
 0.731
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.707
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.682
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
   
 0.673
Fasn
Fatty acid synthase.
   
 0.671
Rpa2
Replication protein A 32 kDa subunit.
   
  0.617
Src42A
Tyrosine-protein kinase.
  
 0.614
fyn
Tyrosine-protein kinase.
  
 0.614
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.