STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc-10-2Rab-3-interacting molecule unc-10. (1461 aa)    
Predicted Functional Partners:
Kdm8
Lysine-specific demethylase 8.
    
 
 0.999
unc-13
Phorbol ester/diacylglycerol-binding protein unc-13.
    
 0.999
Bzrap1
Peripheral-type benzodiazepine receptor-associated protein 1.
    
 0.999
rab-3
Ras-related protein Rab-3.
    
 0.997
kazna
Kazrin-A.
    
 0.994
syd-2
Liprin-alpha.
    
 0.994
snb-1
Synaptobrevin-1.
   
 0.992
Ddc
Aromatic-L-amino-acid decarboxylase.
    
 0.991
unc-18
Putative acetylcholine regulator unc-18; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.991
Syn
Synapsin.
     
 0.991
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.