Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCORBCL-6 corepressor. (710 aa)    
Predicted Functional Partners:
PcgF3
Polycomb group RING finger protein 3.
    
 0.915
Yaf2
Zn-finger in Ran binding protein.
    
 
 0.879
Usp7
Ubiquitin carboxyl-terminal hydrolase 7.
    
 0.846
MLLT1
Protein ENL.
    
 
 0.838
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.786
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.786
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.781
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.781
PDZD4
PDZ domain-containing protein 4.
    
 0.715
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.698
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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