STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cib2Calcium and integrin-binding family member 2. (257 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.944
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.800
MYO1F
Unconventional myosin-If; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.736
CaMKII
Calcium/calmodulin-dependent protein kinase type II alpha chain.
    
 0.733
tni-3
Troponin I 3.
   
 0.725
Dclk1
Serine/threonine-protein kinase DCLK1.
   
 0.707
Dhc64C
Dynein heavy chain, cytoplasmic.
    
 0.688
DYH1B
Cytoplasmic dynein 2 heavy chain 1.
    
 0.688
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.678
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.678
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.