STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP6Rho GTPase-activating protein 6. (598 aa)    
Predicted Functional Partners:
Rho1
Ras-like GTP-binding protein Rho1.
    
 0.813
F52C9.5
Uncharacterized protein.
    
 0.777
Rac1
Ras-related C3 botulinum toxin substrate 1.
    
 0.777
Rhou
Rho-related GTP-binding protein RhoU.
    
 0.777
ASPM
Abnormal spindle-like microcephaly-associated protein.
   
 
 0.761
T02_14995
Uncharacterized protein.
   
 
 0.761
T02_14984
Uncharacterized protein.
   
    0.735
SI
Sucrase-isomaltase, intestinal; Belongs to the glycosyl hydrolase 31 family.
    
  0.723
SI-2
Sucrase-isomaltase, intestinal; Belongs to the glycosyl hydrolase 31 family.
    
  0.723
Racgap1
Rac GTPase-activating protein 1.
   
 
 
0.721
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.