PCF11 protein (Trichinella nativa) - STRING interaction network

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

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[Homology]

Score

PCF11

Pre-mRNA cleavage complex 2 protein Pcf11. (1286 aa)

Predicted Functional Partners:

T02_13508

0.999

T02_10131

0.997

Cstf3

0.996

Cpsf1

0.996

CPSF3

0.996

ssu72

0.991

CSTF3

0.980

Sympk

0.979

Sympk-2

0.979

fip1l1

0.961

Your Current Organism:

Trichinella nativa

NCBI taxonomy Id: 6335
Other names: T. nativa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF3	CSTF3	A0A0V1LGR4	A0A0V1LGE2	Cleavage and polyadenylation specificity factor subunit 3.	Cleavage stimulation factor subunit 3; Belongs to the actin family.	0.913
CPSF3	Cpsf1	A0A0V1LGR4	A0A0V1LFM9	Cleavage and polyadenylation specificity factor subunit 3.	Cleavage and polyadenylation specificity factor subunit 1.	0.999
CPSF3	Cstf3	A0A0V1LGR4	A0A0V1L6F3	Cleavage and polyadenylation specificity factor subunit 3.	Cleavage stimulation factor subunit 3.	0.958
CPSF3	PCF11	A0A0V1LGR4	A0A0V1LJZ4	Cleavage and polyadenylation specificity factor subunit 3.	Pre-mRNA cleavage complex 2 protein Pcf11.	0.996
CPSF3	Sympk	A0A0V1LGR4	A0A0V1KYQ3	Cleavage and polyadenylation specificity factor subunit 3.	Symplekin.	0.983
CPSF3	Sympk-2	A0A0V1LGR4	A0A0V1L710	Cleavage and polyadenylation specificity factor subunit 3.	Symplekin.	0.983
CPSF3	T02_10131	A0A0V1LGR4	A0A0V1LEE7	Cleavage and polyadenylation specificity factor subunit 3.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
CPSF3	T02_13508	A0A0V1LGR4	A0A0V1LSR2	Cleavage and polyadenylation specificity factor subunit 3.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.921
CPSF3	fip1l1	A0A0V1LGR4	A0A0V1LC93	Cleavage and polyadenylation specificity factor subunit 3.	Pre-mRNA 3'-end-processing factor FIP1.	0.999
CPSF3	ssu72	A0A0V1LGR4	A0A0V1KRW1	Cleavage and polyadenylation specificity factor subunit 3.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.998
CSTF3	CPSF3	A0A0V1LGE2	A0A0V1LGR4	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Cleavage and polyadenylation specificity factor subunit 3.	0.913
CSTF3	Cpsf1	A0A0V1LGE2	A0A0V1LFM9	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Cleavage and polyadenylation specificity factor subunit 1.	0.980
CSTF3	PCF11	A0A0V1LGE2	A0A0V1LJZ4	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Pre-mRNA cleavage complex 2 protein Pcf11.	0.980
CSTF3	Sympk	A0A0V1LGE2	A0A0V1KYQ3	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Symplekin.	0.877
CSTF3	Sympk-2	A0A0V1LGE2	A0A0V1L710	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Symplekin.	0.877
CSTF3	T02_10131	A0A0V1LGE2	A0A0V1LEE7	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Cleavage and polyadenylation specificity factor subunit 2.	0.891
CSTF3	T02_13508	A0A0V1LGE2	A0A0V1LSR2	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.881
CSTF3	fip1l1	A0A0V1LGE2	A0A0V1LC93	Cleavage stimulation factor subunit 3; Belongs to the actin family.	Pre-mRNA 3'-end-processing factor FIP1.	0.982
CSTF3	ssu72	A0A0V1LGE2	A0A0V1KRW1	Cleavage stimulation factor subunit 3; Belongs to the actin family.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.547
Cpsf1	CPSF3	A0A0V1LFM9	A0A0V1LGR4	Cleavage and polyadenylation specificity factor subunit 1.	Cleavage and polyadenylation specificity factor subunit 3.	0.999