STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T02_6043Mitochondrial intermediate peptidase. (965 aa)    
Predicted Functional Partners:
XPNPEP3
Putative Xaa-Pro aminopeptidase 3.
   
 
 0.595
unc-10
Rab-3-interacting molecule unc-10.
   
   0.588
unc-10-2
Rab-3-interacting molecule unc-10.
   
   0.588
T02_9931
Mitochondrial-processing peptidase subunit alpha.
   
  
 0.545
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
  
 0.544
Afmid
Kynurenine formamidase.
    
 0.543
Lipe
Hormone-sensitive lipase.
    
 0.543
T02_10019
Zinc phosphodiesterase ELAC protein 2.
  
  
 0.534
IDE
Insulin-degrading enzyme; Belongs to the peptidase S1 family.
   
 
 0.530
XRCC6BP1
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.529
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.