STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T02_7322Acetylcholine receptor subunit alpha-like 1. (494 aa)    
Predicted Functional Partners:
Pxdn
Peroxidasin-like protein.
      
 0.811
Esyt2
Protein CLEC16A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.811
ATP6AP2
WD repeat-containing protein 44.
      
 0.811
AQR
Intron-binding protein aquarius.
      
 0.811
pxn-1
Peroxidasin-like protein.
      
 0.811
Cbs
Cystathionine beta-synthase.
      
 0.684
C06E1.8
Putative zinc finger protein C06E1.8.
      
 0.684
UAP1
UDP-N-acetylhexosamine pyrophosphorylase.
      
 0.552
Jph3
Junctophilin-3.
      
 0.551
Eif4a3
Eukaryotic initiation factor 4A-III.
      
 0.551
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.