STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSP90B1Endoplasmin. (828 aa)    
Predicted Functional Partners:
dnj-20
DnaJ-like protein dnj-20.
  
 0.965
Pdia6
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
  
 0.965
CALR
Calreticulin.
   
 0.964
CALR-2
Calreticulin.
   
 0.964
hyou1
Hypoxia up-regulated protein 1.
  
 0.948
SUGT1
Suppressor of G2 allele of SKP1-like protein.
    
 0.945
chordc1
Cysteine and histidine-rich domain-containing protein 1.
   
 0.940
T02_8057
Serine/threonine-protein phosphatase 5.
    
 0.932
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.928
CANX
Calnexin.
   
 
 0.925
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.