STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1AStructural maintenance of chromosomes protein 1A; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily. (2376 aa)    
Predicted Functional Partners:
REC8
Meiotic recombination protein REC8-like protein.
   
 0.999
STAG1
Cohesin subunit SA-1.
   
 0.999
Pds5b
Sister chromatid cohesion protein PDS5-like protein B.
   
 0.995
Plk1
Serine/threonine-protein kinase PLK.
   
 0.995
SAK
Serine/threonine-protein kinase PLK4.
   
 0.971
ESPL1
Separin.
   
 0.945
smc3
Structural maintenance of chromosomes protein 3.
  
0.929
smc3-2
Structural maintenance of chromosomes protein 3.
  
0.929
Smc3
Structural maintenance of chromosomes protein 3.
   
 0.924
smc3-3
Structural maintenance of chromosomes protein 3.
   
0.924
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.