Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX6B-2 | SLC6A1-3 | A0A0V1L486 | A0A0V1LTS5 | Cytochrome c oxidase subunit 6b-2. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.480 |
COX6B-2 | SerT | A0A0V1L486 | A0A0V1LM53 | Cytochrome c oxidase subunit 6b-2. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.527 |
COX6B-2 | dat-1 | A0A0V1L486 | A0A0V1KYR6 | Cytochrome c oxidase subunit 6b-2. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.527 |
Cyb5r4 | SLC6A1-3 | A0A0V1LVL7 | A0A0V1LTS5 | Cytochrome b5 reductase 4. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.451 |
Cyb5r4 | SerT | A0A0V1LVL7 | A0A0V1LM53 | Cytochrome b5 reductase 4. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.406 |
Cyb5r4 | T02_14598 | A0A0V1LVL7 | A0A0V1LB17 | Cytochrome b5 reductase 4. | Uncharacterized protein. | 0.498 |
Cyb5r4 | dat-1 | A0A0V1LVL7 | A0A0V1KYR6 | Cytochrome b5 reductase 4. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.406 |
Cyb5r4 | unc-64 | A0A0V1LVL7 | A0A0V1L670 | Cytochrome b5 reductase 4. | Syntaxin-1A-like protein; Belongs to the syntaxin family. | 0.498 |
SLC6A1-3 | COX6B-2 | A0A0V1LTS5 | A0A0V1L486 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Cytochrome c oxidase subunit 6b-2. | 0.480 |
SLC6A1-3 | Cyb5r4 | A0A0V1LTS5 | A0A0V1LVL7 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Cytochrome b5 reductase 4. | 0.451 |
SLC6A1-3 | SerT | A0A0V1LTS5 | A0A0V1LM53 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.469 |
SLC6A1-3 | T02_14598 | A0A0V1LTS5 | A0A0V1LB17 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Uncharacterized protein. | 0.466 |
SLC6A1-3 | dat-1 | A0A0V1LTS5 | A0A0V1KYR6 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.461 |
SLC6A1-3 | glt-4 | A0A0V1LTS5 | A0A0V1LHK3 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Amino acid transporter. | 0.483 |
SLC6A1-3 | unc-64 | A0A0V1LTS5 | A0A0V1L670 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Syntaxin-1A-like protein; Belongs to the syntaxin family. | 0.466 |
SerT | COX6B-2 | A0A0V1LM53 | A0A0V1L486 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Cytochrome c oxidase subunit 6b-2. | 0.527 |
SerT | Cyb5r4 | A0A0V1LM53 | A0A0V1LVL7 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Cytochrome b5 reductase 4. | 0.406 |
SerT | SLC6A1-3 | A0A0V1LM53 | A0A0V1LTS5 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.469 |
SerT | T02_14598 | A0A0V1LM53 | A0A0V1LB17 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Uncharacterized protein. | 0.666 |
SerT | glt-4 | A0A0V1LM53 | A0A0V1LHK3 | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Amino acid transporter. | 0.702 |
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