STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iff-2Eukaryotic translation initiation factor 5A. (162 aa)    
Predicted Functional Partners:
Mrpl1
39S ribosomal protein L1, mitochondrial.
  
 
 0.999
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.999
RpL13A
60S ribosomal protein L13a.
  
 
 0.999
Dhps
Deoxyhypusine synthase.
   
 0.999
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
rpl11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.999
RpL5
60S ribosomal protein L5.
  
 
 0.999
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.999
rps3-a
40S ribosomal protein S3-A.
   
 
 0.999
rpl-7
Ribosomal protein L30p/L7e.
  
 
 0.999
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.