STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ooc-5Torsin-like protein. (352 aa)    
Predicted Functional Partners:
Cops4
COP9 signalosome complex subunit 4.
   
  0.754
CSN5
COP9 signalosome complex subunit 5.
     
 0.695
T07_9550
Uncharacterized protein.
    
  0.689
unc-41
Putative stoned B-like protein.
    
  0.689
cops8
COP9 signalosome complex subunit 8.
   
 
  0.653
dyc-1
Dystrophin-like protein 1.
      
 0.564
UBQ11
Polyubiquitin 11.
     
 0.537
UBC
Polyubiquitin-C.
     
 0.537
UBB
Polyubiquitin-C.
     
 0.537
UBB-2
Polyubiquitin-B.
     
 0.537
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.