STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a9Zinc transporter ZIP9. (590 aa)    
Predicted Functional Partners:
Slc30a5
Zinc transporter 5.
   
 
 0.603
SLC39A11
Zinc transporter ZIP11.
    
 
 0.578
Slc39a8
Zinc transporter ZIP8.
    
 
 0.570
Slc30a2
Zinc transporter 2.
    
 
 0.529
Slc30a1
Zinc transporter 1.
    
 
 0.526
slc30a9
Zinc transporter 9.
      
 0.483
F31D4.5
Pleckstrin homology domain-containing family D member 1.
      
 0.480
Ubfd1
Ubiquitin domain-containing protein UBFD1.
      
 0.457
MTP5
Metal tolerance protein 5.
      
 0.455
Slc30a1-2
Zinc transporter 1.
    
 
 0.409
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.