STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAP1Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1. (879 aa)    
Predicted Functional Partners:
Appl1
DCC-interacting protein 13-alpha.
   
 
 0.915
ARFGAP3
ADP-ribosylation factor GTPase-activating protein 3.
    
0.865
ARFGAP1
ADP-ribosylation factor GTPase-activating protein 1.
    
 0.857
cenG1A
Centaurin-gamma-1A.
   
0.846
Acap2
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2.
     
0.819
Rab11a
Ras-related protein Rab-11A.
    
 0.809
Rab35
Ras-related protein Rab-35.
    
 
 0.738
Exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.732
exo70
Exocyst complex component 7.
     
 0.732
arf4
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
    
 0.697
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.