STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PignGPI ethanolamine phosphate transferase 1. (1747 aa)    
Predicted Functional Partners:
PIGB
Mannosyltransferase.
    
 0.915
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.898
T07_14218
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.801
PIGT
GPI transamidase component PIG-T.
    
 0.669
RPS6KB1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 
0.585
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
     
 0.584
Piga
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
     
 0.581
erlin1
Erlin-1.
   
 
  0.580
TYMS
Thymidylate synthase.
    
  0.567
pkn2
Serine/threonine-protein kinase N2.
    
  0.556
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.