STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc-9-3Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (874 aa)    
Predicted Functional Partners:
T07_13158
Uncharacterized protein.
    
   0.814
comt
Vesicle-fusing ATPase 1.
    
  0.536
snb-1
Synaptobrevin-1.
     
 0.532
csnk2a1
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 
 0.526
DRG1
Developmentally-regulated GTP-binding protein 1.
    
   0.514
T07_1074
Uncharacterized protein.
  
     0.513
SLC25A4
ADP/ATP translocase 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.512
T07_14715
PDZ domain-containing protein.
    
   0.483
Pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.483
NVL
Nuclear valosin-containing protein-like; Belongs to the AAA ATPase family.
    
  0.468
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.