STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T07_4462Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
Nid1
Nidogen-1.
     
 0.690
T07_8119
Uncharacterized protein.
   
 0.634
leo1
RNA polymerase-associated protein LEO1.
   
 0.634
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
    
 0.597
T07_4102
Uncharacterized protein.
    
 0.597
Ptprm
Receptor-type tyrosine-protein phosphatase mu.
    
 0.597
ptp-3
Tyrosine-protein phosphatase Lar-like.
    
 0.597
T07_12905
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
 0.596
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.594
pat-2
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.580
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.