STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N-2Neurogenic locus Notch protein. (833 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.888
unc-89
Muscle M-line assembly protein unc-89.
   
 0.808
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.808
Cpsf7
Suppressor of hairless protein.
    
 0.749
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.739
TONSL
Tonsoku-like protein.
   
 0.738
T07_11284
Uncharacterized protein.
    
 0.639
oxt
Xylosyltransferase oxt.
    
 0.599
AKT1
Non-specific serine/threonine protein kinase.
    
 0.588
Psmd14
26S proteasome non-ATPase regulatory subunit 14.
    
 0.583
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.