STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cah-2Putative carbonic anhydrase-like protein 2; Belongs to the alpha-carbonic anhydrase family. (532 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2-like protein.
   
 
 0.822
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.684
Utp18
U3 small nucleolar RNA-associated protein 18-like protein.
   
  
 0.662
Ppan
Suppressor of SWI4 1-like protein.
   
    0.651
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.650
bca-1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.644
RpL5
60S ribosomal protein L5.
    
 
 0.641
T07_12334
Uncharacterized protein.
    
 
 0.641
Wdr43
WD repeat-containing protein 43.
   
    0.627
GTPBP4
Nucleolar GTP-binding protein 1.
   
  
 0.626
Your Current Organism:
Trichinella nelsoni
NCBI taxonomy Id: 6336
Other names: T. nelsoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.