STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM57912.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (452 aa)    
Predicted Functional Partners:
dnaG
DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
 0.986
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.873
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
  
  
 0.857
EIM57087.1
DNA replication protein; PFAM: IstB-like ATP binding protein.
  
 
 0.852
EIM56173.1
PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase.
  
 
 0.841
EIM58435.1
PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase.
  
 
 0.841
EIM57910.1
Putative signaling protein consisting of a modified GGDEF domain and a DHH domain; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
  
 0.830
EIM56164.1
Hypothetical protein.
   
 
 0.794
tuf
Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.769
EIM57908.1
PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
 
 
 0.758
Your Current Organism:
Eubacterium cellulosolvens
NCBI taxonomy Id: 633697
Other names: Eubacterium cellulosolvens 6, Eubacterium cellulosolvens ATCC 43171, [. cellulosolvens 6, [Eubacterium] cellulosolvens 6
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