STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T4E_4367Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.891
Tonsl
Tonsoku-like protein.
    
 0.806
LAMA2
Laminin subunit alpha-2.
    
 0.800
epi-1
Laminin-like protein epi-1.
    
 0.800
Neo1
Neogenin-like protein.
    
 0.775
UNC5C
Netrin receptor UNC5C.
     
 0.715
DAG1
Dystroglycan.
    
 0.687
C05D9.3
Putative integrin beta-like protein.
    
 0.682
pat-3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.682
ina-1
Integrin alpha ina-1.
    
 0.650
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.