STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD3Golgi resident protein GCP60. (439 aa)    
Predicted Functional Partners:
CTTN
Src substrate cortactin.
    
 0.640
Hcls1
Hematopoietic lineage cell-specific protein.
    
 0.640
T4E_1690
Uncharacterized protein.
    
 0.640
T4E_1137
Uncharacterized protein.
    
 0.640
Blzf1
Golgin-45.
    
 
 0.628
TBC1D22B
TBC1 domain family member 22B.
    
 
 0.573
EPRS
Bifunctional glutamate/proline--tRNA ligase.
      
 0.542
T4E_3381
Uncharacterized protein.
    
 0.516
T4E_6624
Protein SPT2-like protein.
    
 0.516
T4E_9353
Uncharacterized protein.
    
 0.516
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.