STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC3Arrestin domain-containing protein 3. (397 aa)    
Predicted Functional Partners:
Tonsl
Tonsoku-like protein.
    
 0.641
Nedd4
E3 ubiquitin-protein ligase Nedd-4.
    
 
 0.612
Txn2
Thioredoxin, mitochondrial.
    
 0.606
Wwp2
NEDD4-like E3 ubiquitin-protein ligase WWP2.
    
 
 0.562
dnajc10
DnaJ-like protein subfamily C member 10.
    
 0.540
Kibra
Protein kibra.
    
 
 0.539
PDIA3
Protein disulfide-isomerase.
    
 0.516
Pdia6
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
    
 0.516
ERP44
Endoplasmic reticulum resident protein 44.
    
 0.516
C14B9.2
Protein disulfide-isomerase.
    
 0.516
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.