STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35B2Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (520 aa)    
Predicted Functional Partners:
Ext2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
   
  
 0.542
PEPD
Xaa-Pro dipeptidase.
    
 0.532
Xpnpep3
Putative Xaa-Pro aminopeptidase 3.
    
 0.532
Xpnpep1
Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family.
    
 0.532
tpst-1
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
  
 
 0.522
slc35b4
UDP-xylose and UDP-N-acetylglucosamine transporter.
      
 0.521
SLC35D1
UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter.
   
  
 0.519
Slc35e1
Solute carrier family 35 member E1.
    
 
 0.519
Uxs1
UDP-glucuronic acid decarboxylase 1.
  
  
 0.516
B4galt7
Beta-1,4-galactosyltransferase 7.
   
  
 0.513
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.