snrnp35 protein (Trichinella pseudospiralis)

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Score

snrnp35

U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (184 aa)

Predicted Functional Partners:

snrpd3

0.983

snr-4

0.981

T4A_13206

0.980

snr-7

0.979

Snrpd1

0.978

T4E_10338

0.977

Snrpb2

0.975

NCBP2

0.971

LUC7L2

0.960

Rbm25

0.960

Your Current Organism:

Trichinella pseudospiralis

NCBI taxonomy Id: 6337
Other names: T. pseudospiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LUC7L2	NCBP2	A0A0V0XY33	A0A0V1K5A8	Putative RNA-binding protein Luc7-like 2.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	0.998
LUC7L2	Rbm25	A0A0V0XY33	A0A0V0Y3I3	Putative RNA-binding protein Luc7-like 2.	RNA-binding protein 25.	0.999
LUC7L2	Snrpb2	A0A0V0XY33	A0A0V1EK90	Putative RNA-binding protein Luc7-like 2.	U2 small nuclear ribonucleoprotein B.	0.792
LUC7L2	Snrpd1	A0A0V0XY33	A0A0V0XVL4	Putative RNA-binding protein Luc7-like 2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
LUC7L2	T4A_13206	A0A0V0XY33	A0A0V1K2Q3	Putative RNA-binding protein Luc7-like 2.	Uncharacterized protein.	0.975
LUC7L2	T4E_10338	A0A0V0XY33	A0A0V0XUP0	Putative RNA-binding protein Luc7-like 2.	U1 small nuclear ribonucleoprotein C.	0.965
LUC7L2	snr-4	A0A0V0XY33	A0A0V0Y996	Putative RNA-binding protein Luc7-like 2.	Small nuclear ribonucleoprotein Sm D2.	0.979
LUC7L2	snr-7	A0A0V0XY33	A0A0V1JCB1	Putative RNA-binding protein Luc7-like 2.	Small nuclear ribonucleoprotein G.	0.964
LUC7L2	snrnp35	A0A0V0XY33	A0A0V0Y476	Putative RNA-binding protein Luc7-like 2.	U11/U12 small nuclear ribonucleoprotein 35 kDa protein.	0.960
LUC7L2	snrpd3	A0A0V0XY33	A0A0V1EH55	Putative RNA-binding protein Luc7-like 2.	Small nuclear ribonucleoprotein Sm D3.	0.953
NCBP2	LUC7L2	A0A0V1K5A8	A0A0V0XY33	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Putative RNA-binding protein Luc7-like 2.	0.998
NCBP2	Rbm25	A0A0V1K5A8	A0A0V0Y3I3	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	RNA-binding protein 25.	0.999
NCBP2	Snrpb2	A0A0V1K5A8	A0A0V1EK90	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	U2 small nuclear ribonucleoprotein B.	0.999
NCBP2	Snrpd1	A0A0V1K5A8	A0A0V0XVL4	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995
NCBP2	T4A_13206	A0A0V1K5A8	A0A0V1K2Q3	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Uncharacterized protein.	0.999
NCBP2	T4E_10338	A0A0V1K5A8	A0A0V0XUP0	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	U1 small nuclear ribonucleoprotein C.	0.965
NCBP2	snr-4	A0A0V1K5A8	A0A0V0Y996	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Small nuclear ribonucleoprotein Sm D2.	0.999
NCBP2	snr-7	A0A0V1K5A8	A0A0V1JCB1	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Small nuclear ribonucleoprotein G.	0.999
NCBP2	snrnp35	A0A0V1K5A8	A0A0V0Y476	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	U11/U12 small nuclear ribonucleoprotein 35 kDa protein.	0.971
NCBP2	snrpd3	A0A0V1K5A8	A0A0V1EH55	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Small nuclear ribonucleoprotein Sm D3.	0.995