STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sft-4Surfeit locus protein 4-like protein. (287 aa)    
Predicted Functional Partners:
Gosr1
Golgi SNAP receptor complex member 1.
    
 
 0.986
T4A_2076
Uncharacterized protein.
    
 
 0.919
sel-9
Suppressor/enhancer of lin-12 protein 9.
   
 0.903
TMED4
Transmembrane emp24 domain-containing protein 4.
   
 0.900
T4E_1979
Putative sulfite oxidase, mitochondrial.
  
 
 0.868
TMED7
Transmembrane emp24 domain-containing protein 7.
   
 0.851
Tstd3
Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3.
    
 0.805
KdelR
ER lumen protein-retaining receptor.
   
 0.793
kdelr2
ER lumen protein retaining receptor 2.
   
 0.793
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
    
  0.791
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.