STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Skiv2l2Superkiller viralicidic activity 2-like 2. (1041 aa)    
Predicted Functional Partners:
Exosc10
Exosome component 10.
   
 0.999
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.999
GLTSCR2
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.999
EXOSC7
Exosome complex component RRP42.
   
 0.998
Exosc4
Exosome complex component RRP41.
   
 0.997
EXOSC3
Exosome complex component RRP40.
   
 0.997
c1d
Nuclear nucleic acid-binding protein C1D.
   
 0.995
EXOSC8
Exosome complex component RRP43.
   
 0.995
E01A2.2
Serrate RNA effector molecule-like protein.
   
 0.994
WDR3
WD repeat-containing protein 3.
   
 0.993
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.