Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GTF3C3 | POLR3C | A0A0V0Y381 | A0A0V0Y5J2 | General transcription factor 3C polypeptide 3. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.853 |
GTF3C3 | T4E_11097 | A0A0V0Y381 | A0A0V0YCM1 | General transcription factor 3C polypeptide 3. | Uncharacterized protein. | 0.579 |
KDM6A | RUVBL1 | A0A0V0Y6W9 | A0A0V0XNK8 | Lysine-specific demethylase 6A. | DNA helicase; Belongs to the RuvB family. | 0.972 |
KDM6A | T4E_11097 | A0A0V0Y6W9 | A0A0V0YCM1 | Lysine-specific demethylase 6A. | Uncharacterized protein. | 0.600 |
KDM6A | dom | A0A0V0Y6W9 | A0A0V0Y3C0 | Lysine-specific demethylase 6A. | Helicase domino. | 0.585 |
KDM6A | lrk-1 | A0A0V0Y6W9 | A0A0V0XHG4 | Lysine-specific demethylase 6A. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.982 |
KDM6A | unc-89-2 | A0A0V0Y6W9 | A0A0V0Y8X9 | Lysine-specific demethylase 6A. | Muscle M-line assembly protein unc-89. | 0.514 |
KDM6A | unc-89-3 | A0A0V0Y6W9 | A0A0V0Y9J0 | Lysine-specific demethylase 6A. | Muscle M-line assembly protein unc-89. | 0.514 |
POLR3C | GTF3C3 | A0A0V0Y5J2 | A0A0V0Y381 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | General transcription factor 3C polypeptide 3. | 0.853 |
POLR3C | T4E_11097 | A0A0V0Y5J2 | A0A0V0YCM1 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.551 |
POLR3C | dom | A0A0V0Y5J2 | A0A0V0Y3C0 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Helicase domino. | 0.622 |
POLR3C | lrk-1 | A0A0V0Y5J2 | A0A0V0XHG4 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.554 |
RUVBL1 | KDM6A | A0A0V0XNK8 | A0A0V0Y6W9 | DNA helicase; Belongs to the RuvB family. | Lysine-specific demethylase 6A. | 0.972 |
RUVBL1 | T4E_11097 | A0A0V0XNK8 | A0A0V0YCM1 | DNA helicase; Belongs to the RuvB family. | Uncharacterized protein. | 0.543 |
RUVBL1 | dom | A0A0V0XNK8 | A0A0V0Y3C0 | DNA helicase; Belongs to the RuvB family. | Helicase domino. | 0.994 |
STARD5 | T4E_11097 | A0A0V0XKI2 | A0A0V0YCM1 | Protein maternal effect lethal 26. | Uncharacterized protein. | 0.577 |
STARD5 | lrk-1 | A0A0V0XKI2 | A0A0V0XHG4 | Protein maternal effect lethal 26. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.406 |
T4E_11097 | GTF3C3 | A0A0V0YCM1 | A0A0V0Y381 | Uncharacterized protein. | General transcription factor 3C polypeptide 3. | 0.579 |
T4E_11097 | KDM6A | A0A0V0YCM1 | A0A0V0Y6W9 | Uncharacterized protein. | Lysine-specific demethylase 6A. | 0.600 |
T4E_11097 | POLR3C | A0A0V0YCM1 | A0A0V0Y5J2 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.551 |
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