Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Egfr | Hgs | A0A0V0XR50 | A0A0V0Y378 | Receptor protein-tyrosine kinase. | Hepatocyte growth factor-regulated tyrosine kinase substrate. | 0.803 |
Egfr | PDZRN4 | A0A0V0XR50 | A0A0V0XQN9 | Receptor protein-tyrosine kinase. | PDZ domain-containing RING finger protein 4. | 0.880 |
Egfr | PTPN23 | A0A0V0XR50 | A0A0V0YA11 | Receptor protein-tyrosine kinase. | Tyrosine-protein phosphatase non-receptor type 23. | 0.922 |
Egfr | Stam | A0A0V0XR50 | A0A0V0Y8F9 | Receptor protein-tyrosine kinase. | Signal transducing adapter molecule 1. | 0.767 |
Egfr | T4E_5753 | A0A0V0XR50 | A0A0V0WGR9 | Receptor protein-tyrosine kinase. | Polyubiquitin-like protein. | 0.574 |
Egfr | Usp37 | A0A0V0XR50 | A0A0V0YD74 | Receptor protein-tyrosine kinase. | Ubiquitin carboxyl-terminal hydrolase. | 0.728 |
Egfr | lrk-1 | A0A0V0XR50 | A0A0V0XHG4 | Receptor protein-tyrosine kinase. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.997 |
Hgs | Egfr | A0A0V0Y378 | A0A0V0XR50 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Receptor protein-tyrosine kinase. | 0.803 |
Hgs | PTPN23 | A0A0V0Y378 | A0A0V0YA11 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Tyrosine-protein phosphatase non-receptor type 23. | 0.886 |
Hgs | RpL40 | A0A0V0Y378 | A0A0V0XYQ9 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Ubiquitin-60S ribosomal protein L40. | 0.894 |
Hgs | Stam | A0A0V0Y378 | A0A0V0Y8F9 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Signal transducing adapter molecule 1. | 0.999 |
Hgs | T4E_5753 | A0A0V0Y378 | A0A0V0WGR9 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Polyubiquitin-like protein. | 0.764 |
Hgs | Usp37 | A0A0V0Y378 | A0A0V0YD74 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Ubiquitin carboxyl-terminal hydrolase. | 0.795 |
Hgs | lrk-1 | A0A0V0Y378 | A0A0V0XHG4 | Hepatocyte growth factor-regulated tyrosine kinase substrate. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.685 |
PDZRN4 | Egfr | A0A0V0XQN9 | A0A0V0XR50 | PDZ domain-containing RING finger protein 4. | Receptor protein-tyrosine kinase. | 0.880 |
PDZRN4 | RpL40 | A0A0V0XQN9 | A0A0V0XYQ9 | PDZ domain-containing RING finger protein 4. | Ubiquitin-60S ribosomal protein L40. | 0.982 |
PDZRN4 | T4E_13 | A0A0V0XQN9 | A0A0V0YHX0 | PDZ domain-containing RING finger protein 4. | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 0.561 |
PDZRN4 | T4E_5753 | A0A0V0XQN9 | A0A0V0WGR9 | PDZ domain-containing RING finger protein 4. | Polyubiquitin-like protein. | 0.766 |
PDZRN4 | Usp37 | A0A0V0XQN9 | A0A0V0YD74 | PDZ domain-containing RING finger protein 4. | Ubiquitin carboxyl-terminal hydrolase. | 0.693 |
PDZRN4 | lrk-1 | A0A0V0XQN9 | A0A0V0XHG4 | PDZ domain-containing RING finger protein 4. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
page 1 of 5