STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHEBGTP-binding protein Rheb. (520 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.980
Itsn1
Intersectin-1.
    
 0.967
Itsn1-2
Intersectin-1.
    
 0.967
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.915
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.915
Trio
Triple functional domain protein.
   
 0.870
dyc-1
Dystrophin-like protein 1.
    
 0.869
Nf1
Neurofibromin.
    
 0.764
Gak
Cyclin-G-associated kinase.
   
 0.754
unc-89-4
Muscle M-line assembly protein unc-89.
    
 0.724
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.