STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPT1Palmitoyl-protein thioesterase 1. (286 aa)    
Predicted Functional Partners:
T4E_3702
Uncharacterized protein.
  
 
 0.901
tmem147
Group XV phospholipase A2.
     
 0.864
ACSL4
Long-chain-fatty-acid--CoA ligase 4.
    
 0.861
acsf2
Acyl-CoA synthetase family member 2, mitochondrial.
    
 0.796
Soat1
O-acyltransferase.
     
 0.721
Dgat1
Diacylglycerol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
     
 0.721
mrpl-49
Putative 39S ribosomal protein L49, mitochondrial.
    
   0.698
F52C9.3
DAGKc domain-containing protein.
     
 0.693
sphk-1
Sphingosine kinase 1.
     
 0.693
T4E_5394
Uncharacterized protein.
    
 0.643
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.