STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naa30N-alpha-acetyltransferase 30. (296 aa)    
Predicted Functional Partners:
NAA35
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
   
 0.999
T4A_13206
Uncharacterized protein.
    
 0.964
GOT2
Aspartate aminotransferase.
     
 0.809
T01C8.5
Aspartate aminotransferase.
   
 
 0.801
KDM1B
Amine oxidase.
   
 
  0.801
SNRPB
Small nuclear ribonucleoprotein-associated protein B.
    
 0.793
SNRPB-2
Small nuclear ribonucleoprotein-associated protein B.
    
 0.793
snrpb
Small nuclear ribonucleoprotein-associated protein B.
    
 0.793
CNDP2
Cytosolic non-specific dipeptidase.
     
 0.790
TP53RK
TP53-regulating kinase.
     
 0.607
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.