STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T4A_12240CBFD_NFYB_HMF domain-containing protein. (165 aa)    
Predicted Functional Partners:
Pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.977
POLE2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 0.972
POLE3
DNA polymerase epsilon subunit 3.
    
 0.914
Pole3
DNA polymerase epsilon subunit 3.
    
 0.914
POLA1
DNA polymerase.
    
 0.866
T4E_5521
DNA polymerase delta catalytic subunit.
    
 0.813
Rev3l
DNA polymerase.
    
 0.795
CDC45
Cell division control protein 45-like protein.
    
 0.785
mcm5-a
DNA helicase; Belongs to the MCM family.
    
 0.731
POLA2
DNA polymerase alpha subunit B.
     
 0.712
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.