STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbx3Chromobox-like protein 3. (160 aa)    
Predicted Functional Partners:
Suv39h1
Histone-lysine N-methyltransferase SUV39H1.
   
 0.916
T4E_522
Histone H3.
   
 0.795
T4A_10341
Histone H3; Belongs to the histone H3 family.
   
 0.795
HHT3
Histone H3; Belongs to the histone H3 family.
   
 0.795
T4E_8548
Uncharacterized protein.
    
 
 0.759
CENPA
Histone H3-like centromeric protein A.
    
 0.719
H3F3C
Histone H3.3C.
    
 0.701
Yaf2
YY1-associated factor 2.
    
 0.695
TFDP1
Transcription factor Dp-1.
   
 0.683
Max
Protein max.
    
 0.667
Your Current Organism:
Trichinella pseudospiralis
NCBI taxonomy Id: 6337
Other names: T. pseudospiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.