STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQP52810.1GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)    
Predicted Functional Partners:
AQP53532.1
Nucleoside 2-deoxyribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.908
AQP53468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.793
AQP53612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
AQP54270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.616
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.538
AQP53003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
AQP53423.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
AQP53424.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
AQP53116.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
BW732_08835
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
Your Current Organism:
Vagococcus penaei
NCBI taxonomy Id: 633807
Other names: CIP 109914, LMG 24833, LMG:24833, V. penaei, Vagococcus penaei Jaffres et al. 2010, Vagococcus sp. CD276, strain CD 276, strain CD276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.