Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQP54191.1 | AQP54357.1 | BW732_08120 | BW732_09055 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
AQP54357.1 | AQP54191.1 | BW732_09055 | BW732_08120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
AQP54357.1 | AQP54358.1 | BW732_09055 | BW732_09060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | 0.861 |
AQP54357.1 | BW732_00860 | BW732_09055 | BW732_00860 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
AQP54357.1 | nadE | BW732_09055 | BW732_09050 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.761 |
AQP54357.1 | rpmE2 | BW732_09055 | BW732_09045 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
AQP54358.1 | AQP54357.1 | BW732_09060 | BW732_09055 | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.861 |
AQP54358.1 | nadE | BW732_09060 | BW732_09050 | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.712 |
AQP54358.1 | rpmE2 | BW732_09060 | BW732_09045 | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
BW732_00860 | AQP54357.1 | BW732_00860 | BW732_09055 | SAM-dependent methyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
nadE | AQP54357.1 | BW732_09050 | BW732_09055 | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
nadE | AQP54358.1 | BW732_09050 | BW732_09060 | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | 0.712 |
nadE | rpmE2 | BW732_09050 | BW732_09045 | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
rpmE2 | AQP54357.1 | BW732_09045 | BW732_09055 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
rpmE2 | AQP54358.1 | BW732_09045 | BW732_09060 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA 2-thiocytidine(32) synthetase TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. | 0.446 |
rpmE2 | nadE | BW732_09045 | BW732_09050 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.480 |