STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK12997.1Chemotaxis signal transduction protein. (340 aa)    
Predicted Functional Partners:
SHK12868.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.998
SHK77032.1
Methyl-accepting chemotaxis protein.
 
 0.995
SHK90394.1
Methyl-accepting chemotaxis protein.
 
 0.995
SHL01179.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.995
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.992
SHK11534.1
Methyl-accepting chemotaxis protein.
 
 0.987
SHK13023.1
Methyl-accepting chemotaxis protein.
 
 0.987
SHK12802.1
Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein.
 
 0.985
SHK12918.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.982
SHK28960.1
Methyl-accepting chemotaxis protein.
 
 0.977
Your Current Organism:
Rhodothermus profundi
NCBI taxonomy Id: 633813
Other names: DSM 22212, JCM 15944, R. profundi, Rhodothermus profundi Marteinsson et al. 2010, Rhodothermus sp. PRI 2902, strain PRI 2902
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