Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK32638.1 | SHK32666.1 | SAMN04488087_0873 | SAMN04488087_0874 | Hydrogenase expression/formation protein HypE. | Hydrogenase expression/formation protein HypD. | 0.999 |
SHK32638.1 | SHK32695.1 | SAMN04488087_0873 | SAMN04488087_0875 | Hydrogenase expression/formation protein HypE. | Hydrogenase expression/formation protein HypC. | 0.998 |
SHK32638.1 | SHK32729.1 | SAMN04488087_0873 | SAMN04488087_0876 | Hydrogenase expression/formation protein HypE. | Hydrogenase maturation protein, carbamoyltransferase HypF. | 0.998 |
SHK32638.1 | SHK32791.1 | SAMN04488087_0873 | SAMN04488087_0878 | Hydrogenase expression/formation protein HypE. | Hydrogenase maturation protease. | 0.900 |
SHK32638.1 | SHK32823.1 | SAMN04488087_0873 | SAMN04488087_0879 | Hydrogenase expression/formation protein HypE. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.857 |
SHK32638.1 | SHK32858.1 | SAMN04488087_0873 | SAMN04488087_0880 | Hydrogenase expression/formation protein HypE. | Coenzyme F420-reducing hydrogenase, gamma subunit. | 0.771 |
SHK32638.1 | SHK32888.1 | SAMN04488087_0873 | SAMN04488087_0881 | Hydrogenase expression/formation protein HypE. | NAD(P)H-flavin reductase. | 0.752 |
SHK32638.1 | SHK32948.1 | SAMN04488087_0873 | SAMN04488087_0883 | Hydrogenase expression/formation protein HypE. | 4Fe-4S dicluster domain-containing protein. | 0.738 |
SHK32638.1 | SHK33110.1 | SAMN04488087_0873 | SAMN04488087_0888 | Hydrogenase expression/formation protein HypE. | Hydrogenase nickel incorporation protein HypB. | 0.908 |
SHK32638.1 | hypA | SAMN04488087_0873 | SAMN04488087_0877 | Hydrogenase expression/formation protein HypE. | Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.941 |
SHK32666.1 | SHK32638.1 | SAMN04488087_0874 | SAMN04488087_0873 | Hydrogenase expression/formation protein HypD. | Hydrogenase expression/formation protein HypE. | 0.999 |
SHK32666.1 | SHK32695.1 | SAMN04488087_0874 | SAMN04488087_0875 | Hydrogenase expression/formation protein HypD. | Hydrogenase expression/formation protein HypC. | 0.999 |
SHK32666.1 | SHK32729.1 | SAMN04488087_0874 | SAMN04488087_0876 | Hydrogenase expression/formation protein HypD. | Hydrogenase maturation protein, carbamoyltransferase HypF. | 0.974 |
SHK32666.1 | SHK32791.1 | SAMN04488087_0874 | SAMN04488087_0878 | Hydrogenase expression/formation protein HypD. | Hydrogenase maturation protease. | 0.908 |
SHK32666.1 | SHK32823.1 | SAMN04488087_0874 | SAMN04488087_0879 | Hydrogenase expression/formation protein HypD. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.862 |
SHK32666.1 | SHK32858.1 | SAMN04488087_0874 | SAMN04488087_0880 | Hydrogenase expression/formation protein HypD. | Coenzyme F420-reducing hydrogenase, gamma subunit. | 0.764 |
SHK32666.1 | SHK32888.1 | SAMN04488087_0874 | SAMN04488087_0881 | Hydrogenase expression/formation protein HypD. | NAD(P)H-flavin reductase. | 0.752 |
SHK32666.1 | SHK32948.1 | SAMN04488087_0874 | SAMN04488087_0883 | Hydrogenase expression/formation protein HypD. | 4Fe-4S dicluster domain-containing protein. | 0.727 |
SHK32666.1 | SHK33110.1 | SAMN04488087_0874 | SAMN04488087_0888 | Hydrogenase expression/formation protein HypD. | Hydrogenase nickel incorporation protein HypB. | 0.968 |
SHK32666.1 | hypA | SAMN04488087_0874 | SAMN04488087_0877 | Hydrogenase expression/formation protein HypD. | Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.927 |
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