Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK16265.1 | SHK16960.1 | SAMN04488087_0498 | SAMN04488087_0526 | Hypothetical protein. | TonB dependent receptor. | 0.659 |
SHK16265.1 | SHK36110.1 | SAMN04488087_0498 | SAMN04488087_0967 | Hypothetical protein. | Hypothetical protein. | 0.597 |
SHK16265.1 | SHK78039.1 | SAMN04488087_0498 | SAMN04488087_1950 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.753 |
SHK16265.1 | SHK87495.1 | SAMN04488087_0498 | SAMN04488087_2199 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.697 |
SHK16960.1 | SHK16265.1 | SAMN04488087_0526 | SAMN04488087_0498 | TonB dependent receptor. | Hypothetical protein. | 0.659 |
SHK16960.1 | SHK36110.1 | SAMN04488087_0526 | SAMN04488087_0967 | TonB dependent receptor. | Hypothetical protein. | 0.553 |
SHK16960.1 | SHK78039.1 | SAMN04488087_0526 | SAMN04488087_1950 | TonB dependent receptor. | Tetratricopeptide repeat-containing protein. | 0.569 |
SHK35780.1 | SHK35818.1 | SAMN04488087_0958 | SAMN04488087_0959 | Oxygen tolerance. | Tetratricopeptide repeat-containing protein. | 0.945 |
SHK35780.1 | SHK35853.1 | SAMN04488087_0958 | SAMN04488087_0960 | Oxygen tolerance. | Ca-activated chloride channel family protein. | 0.950 |
SHK35780.1 | SHK35891.1 | SAMN04488087_0958 | SAMN04488087_0961 | Oxygen tolerance. | Ca-activated chloride channel family protein. | 0.953 |
SHK35780.1 | SHK36110.1 | SAMN04488087_0958 | SAMN04488087_0967 | Oxygen tolerance. | Hypothetical protein. | 0.784 |
SHK35780.1 | SHK36153.1 | SAMN04488087_0958 | SAMN04488087_0968 | Oxygen tolerance. | Protein of unknown function DUF58. | 0.795 |
SHK35780.1 | SHK87495.1 | SAMN04488087_0958 | SAMN04488087_2199 | Oxygen tolerance. | Outer membrane receptor proteins, mostly Fe transport. | 0.424 |
SHK35818.1 | SHK35780.1 | SAMN04488087_0959 | SAMN04488087_0958 | Tetratricopeptide repeat-containing protein. | Oxygen tolerance. | 0.945 |
SHK35818.1 | SHK35853.1 | SAMN04488087_0959 | SAMN04488087_0960 | Tetratricopeptide repeat-containing protein. | Ca-activated chloride channel family protein. | 0.894 |
SHK35818.1 | SHK35891.1 | SAMN04488087_0959 | SAMN04488087_0961 | Tetratricopeptide repeat-containing protein. | Ca-activated chloride channel family protein. | 0.874 |
SHK35818.1 | SHK36110.1 | SAMN04488087_0959 | SAMN04488087_0967 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.740 |
SHK35818.1 | SHK36153.1 | SAMN04488087_0959 | SAMN04488087_0968 | Tetratricopeptide repeat-containing protein. | Protein of unknown function DUF58. | 0.523 |
SHK35853.1 | SHK35780.1 | SAMN04488087_0960 | SAMN04488087_0958 | Ca-activated chloride channel family protein. | Oxygen tolerance. | 0.950 |
SHK35853.1 | SHK35818.1 | SAMN04488087_0960 | SAMN04488087_0959 | Ca-activated chloride channel family protein. | Tetratricopeptide repeat-containing protein. | 0.894 |
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