STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK37167.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
SHK36901.1
WD40-like Beta Propeller Repeat.
  
 
 
 0.899
SHK09098.1
WD40-like Beta Propeller Repeat.
  
 
 
 0.861
SHK62079.1
WD40-like Beta Propeller Repeat.
    
 
 0.796
SHK68682.1
WD40-like Beta Propeller Repeat.
    
 
 0.796
SHK88250.1
Hypothetical protein.
  
   
 0.676
SHK04668.1
Uncharacterized membrane protein.
  
     0.673
SHK37133.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.634
SHK59144.1
Hypothetical protein.
  
     0.625
SHK37201.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.601
SHK04524.1
Dehydrogenase (flavoprotein).
  
    0.553
Your Current Organism:
Rhodothermus profundi
NCBI taxonomy Id: 633813
Other names: DSM 22212, JCM 15944, R. profundi, Rhodothermus profundi Marteinsson et al. 2010, Rhodothermus sp. PRI 2902, strain PRI 2902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.