Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK37235.1 | SHK37269.1 | SAMN04488087_1000 | SAMN04488087_1001 | Probable regulatory domain-containing protein. | KaiC domain protein, AF_0795 family. | 0.953 |
SHK37235.1 | SHK44498.1 | SAMN04488087_1000 | SAMN04488087_1105 | Probable regulatory domain-containing protein. | Protein of unknown function. | 0.497 |
SHK37235.1 | SHK44532.1 | SAMN04488087_1000 | SAMN04488087_1106 | Probable regulatory domain-containing protein. | Serine protease, ClpP class. | 0.433 |
SHK37235.1 | SHK50668.1 | SAMN04488087_1000 | SAMN04488087_1316 | Probable regulatory domain-containing protein. | Hypothetical protein. | 0.508 |
SHK37269.1 | SHK37235.1 | SAMN04488087_1001 | SAMN04488087_1000 | KaiC domain protein, AF_0795 family. | Probable regulatory domain-containing protein. | 0.953 |
SHK37269.1 | SHK44498.1 | SAMN04488087_1001 | SAMN04488087_1105 | KaiC domain protein, AF_0795 family. | Protein of unknown function. | 0.554 |
SHK37269.1 | SHK44532.1 | SAMN04488087_1001 | SAMN04488087_1106 | KaiC domain protein, AF_0795 family. | Serine protease, ClpP class. | 0.488 |
SHK37269.1 | SHK50668.1 | SAMN04488087_1001 | SAMN04488087_1316 | KaiC domain protein, AF_0795 family. | Hypothetical protein. | 0.601 |
SHK44465.1 | SHK44498.1 | SAMN04488087_1104 | SAMN04488087_1105 | Hypothetical protein. | Protein of unknown function. | 0.547 |
SHK44465.1 | SHK44532.1 | SAMN04488087_1104 | SAMN04488087_1106 | Hypothetical protein. | Serine protease, ClpP class. | 0.514 |
SHK44465.1 | SHK44561.1 | SAMN04488087_1104 | SAMN04488087_1107 | Hypothetical protein. | Membrane associated serine protease, rhomboid family. | 0.514 |
SHK44498.1 | SHK37235.1 | SAMN04488087_1105 | SAMN04488087_1000 | Protein of unknown function. | Probable regulatory domain-containing protein. | 0.497 |
SHK44498.1 | SHK37269.1 | SAMN04488087_1105 | SAMN04488087_1001 | Protein of unknown function. | KaiC domain protein, AF_0795 family. | 0.554 |
SHK44498.1 | SHK44465.1 | SAMN04488087_1105 | SAMN04488087_1104 | Protein of unknown function. | Hypothetical protein. | 0.547 |
SHK44498.1 | SHK44532.1 | SAMN04488087_1105 | SAMN04488087_1106 | Protein of unknown function. | Serine protease, ClpP class. | 0.723 |
SHK44498.1 | SHK44561.1 | SAMN04488087_1105 | SAMN04488087_1107 | Protein of unknown function. | Membrane associated serine protease, rhomboid family. | 0.723 |
SHK44498.1 | SHK47316.1 | SAMN04488087_1105 | SAMN04488087_1198 | Protein of unknown function. | Uncharacterized conserved protein, DUF2267 family. | 0.448 |
SHK44498.1 | SHK50668.1 | SAMN04488087_1105 | SAMN04488087_1316 | Protein of unknown function. | Hypothetical protein. | 0.558 |
SHK44532.1 | SHK37235.1 | SAMN04488087_1106 | SAMN04488087_1000 | Serine protease, ClpP class. | Probable regulatory domain-containing protein. | 0.433 |
SHK44532.1 | SHK37269.1 | SAMN04488087_1106 | SAMN04488087_1001 | Serine protease, ClpP class. | KaiC domain protein, AF_0795 family. | 0.488 |
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