Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK06609.1 | SHK45111.1 | SAMN04488087_0160 | SAMN04488087_1124 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.857 |
SHK30422.1 | SHK45111.1 | SAMN04488087_0800 | SAMN04488087_1124 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.857 |
SHK45038.1 | SHK45072.1 | SAMN04488087_1122 | SAMN04488087_1123 | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | UDP-glucose 4-epimerase. | 0.595 |
SHK45038.1 | SHK45111.1 | SAMN04488087_1122 | SAMN04488087_1124 | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.589 |
SHK45038.1 | SHK45144.1 | SAMN04488087_1122 | SAMN04488087_1125 | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.558 |
SHK45072.1 | SHK45038.1 | SAMN04488087_1123 | SAMN04488087_1122 | UDP-glucose 4-epimerase. | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | 0.595 |
SHK45072.1 | SHK45111.1 | SAMN04488087_1123 | SAMN04488087_1124 | UDP-glucose 4-epimerase. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.773 |
SHK45072.1 | SHK45144.1 | SAMN04488087_1123 | SAMN04488087_1125 | UDP-glucose 4-epimerase. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.773 |
SHK45072.1 | SHK45182.1 | SAMN04488087_1123 | SAMN04488087_1126 | UDP-glucose 4-epimerase. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.524 |
SHK45072.1 | SHK45312.1 | SAMN04488087_1123 | SAMN04488087_1130 | UDP-glucose 4-epimerase. | Serine/threonine-protein kinase RsbW. | 0.590 |
SHK45111.1 | SHK06609.1 | SAMN04488087_1124 | SAMN04488087_0160 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.857 |
SHK45111.1 | SHK30422.1 | SAMN04488087_1124 | SAMN04488087_0800 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.857 |
SHK45111.1 | SHK45038.1 | SAMN04488087_1124 | SAMN04488087_1122 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | 0.589 |
SHK45111.1 | SHK45072.1 | SAMN04488087_1124 | SAMN04488087_1123 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | UDP-glucose 4-epimerase. | 0.773 |
SHK45111.1 | SHK45144.1 | SAMN04488087_1124 | SAMN04488087_1125 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
SHK45111.1 | SHK45182.1 | SAMN04488087_1124 | SAMN04488087_1126 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.671 |
SHK45111.1 | SHK45312.1 | SAMN04488087_1124 | SAMN04488087_1130 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Serine/threonine-protein kinase RsbW. | 0.607 |
SHK45111.1 | SHK94841.1 | SAMN04488087_1124 | SAMN04488087_2353 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.857 |
SHK45111.1 | cmk | SAMN04488087_1124 | SAMN04488087_1099 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.715 |
SHK45111.1 | smc | SAMN04488087_1124 | SAMN04488087_1699 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.966 |
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