Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHK18810.1 | SHK48427.1 | SAMN04488087_0595 | SAMN04488087_1235 | Translation elongation factor 2 (EF-2/EF-G). | Heme exporter protein A. | 0.473 |
| SHK18810.1 | rpsE | SAMN04488087_0595 | SAMN04488087_2475 | Translation elongation factor 2 (EF-2/EF-G). | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.990 |
| SHK18810.1 | rpsI | SAMN04488087_0595 | SAMN04488087_0721 | Translation elongation factor 2 (EF-2/EF-G). | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.988 |
| SHK18810.1 | rpsK | SAMN04488087_0595 | SAMN04488087_2483 | Translation elongation factor 2 (EF-2/EF-G). | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.991 |
| SHK19961.1 | SHK36235.1 | SAMN04488087_0635 | SAMN04488087_0970 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein B. | 0.855 |
| SHK19961.1 | SHK36270.1 | SAMN04488087_0635 | SAMN04488087_0971 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein C. | 0.864 |
| SHK19961.1 | SHK36345.1 | SAMN04488087_0635 | SAMN04488087_0973 | Cytochrome c-type biogenesis protein CcmF. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.905 |
| SHK19961.1 | SHK48427.1 | SAMN04488087_0635 | SAMN04488087_1235 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein A. | 0.460 |
| SHK36235.1 | SHK19961.1 | SAMN04488087_0970 | SAMN04488087_0635 | Heme exporter protein B. | Cytochrome c-type biogenesis protein CcmF. | 0.855 |
| SHK36235.1 | SHK36270.1 | SAMN04488087_0970 | SAMN04488087_0971 | Heme exporter protein B. | Heme exporter protein C. | 0.999 |
| SHK36235.1 | SHK36345.1 | SAMN04488087_0970 | SAMN04488087_0973 | Heme exporter protein B. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.976 |
| SHK36235.1 | SHK48427.1 | SAMN04488087_0970 | SAMN04488087_1235 | Heme exporter protein B. | Heme exporter protein A. | 0.997 |
| SHK36270.1 | SHK19961.1 | SAMN04488087_0971 | SAMN04488087_0635 | Heme exporter protein C. | Cytochrome c-type biogenesis protein CcmF. | 0.864 |
| SHK36270.1 | SHK36235.1 | SAMN04488087_0971 | SAMN04488087_0970 | Heme exporter protein C. | Heme exporter protein B. | 0.999 |
| SHK36270.1 | SHK36345.1 | SAMN04488087_0971 | SAMN04488087_0973 | Heme exporter protein C. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.999 |
| SHK36270.1 | SHK48427.1 | SAMN04488087_0971 | SAMN04488087_1235 | Heme exporter protein C. | Heme exporter protein A. | 0.996 |
| SHK36345.1 | SHK19961.1 | SAMN04488087_0973 | SAMN04488087_0635 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Cytochrome c-type biogenesis protein CcmF. | 0.905 |
| SHK36345.1 | SHK36235.1 | SAMN04488087_0973 | SAMN04488087_0970 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Heme exporter protein B. | 0.976 |
| SHK36345.1 | SHK36270.1 | SAMN04488087_0973 | SAMN04488087_0971 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Heme exporter protein C. | 0.999 |
| SHK36345.1 | SHK48427.1 | SAMN04488087_0973 | SAMN04488087_1235 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Heme exporter protein A. | 0.602 |
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